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optimap
optimap

🚀 Getting Started

  • Installing optimap
  • Overview of optimap
  • Using optimap
  • Monochrome Viewer
  • Interactive Plots
  • How to cite

🚀 Tutorials

  • Tutorials
    • Tutorial 0: Overview of optimap
    • Tutorial 1: Basics
    • Tutorial 2: Import / Export (I/O)
    • Tutorial 3: Measurement of Fluorescent Signals and Waves
    • Tutorial 4: Working with Image Masks
    • Tutorial 5: Motion Compensation
    • Tutorial 6: Activation Maps and Beat Detection
    • Tutorial 7: Conduction Velocity
    • Tutorial 8: Ratiometry
    • Tutorial 9: Action Potential Duration
    • Tutorial 10: Phase and Singularities during VF
    • Tutorial 12: Plotting Optical Traces
    • Tutorial 13: Smoothing
    • Example Data Files

Notes

  • Contributing
  • OpenCV with CUDA support
  • Bibliography

📚 API Reference

  • optimap
    • optimap.activation
    • optimap.image
    • optimap.motion
    • optimap.phase
    • optimap.trace
    • optimap.utils
    • optimap.video
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Copyright © 2024, Jan Lebert, Jan Christoph
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